Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQTITANLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATE----LIFGIAKVTKAQKVLLLAPTFAEYERAFFDAEIVYAELTKETNFAAVEIVLE-ILERDTEIEAVCLCNPNNPTGQLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINNLERFPHVAIIRAFTKFFAIPGLRLGYLLTKNDLLAEALMQMREPWSINT-FADLAGQMLL-EDEAYIRQTFDWINEERDFLYRGLSRFSAL-TVYRPTVNYIFFHLEKPLDLRKELLLKGIFIRSCANYRGLTENYYRVAVKSRADNSQLLTALEVIFSGN |
| 1FG7 Chain:A ((34-351)) | ----------------------------LNANEYPTAVEFQLTQ------QTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGK-DAILYCPPTYGMYS---VSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYIEFCPQ---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRD-QNKQPSLSGCLRITVGTREESQRVIDAL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230980 for 2605 contacts (-88.7/contact) +
2D Compatibility (PS) -33709 + (NN) -14245 + (LL) 3396
1D Compatibility (HY) -26000 + (ID) 4600
Total energy: -306138.0 ( -117.52 by residue)
QMean score : 0.454
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