Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKEITDATFEQ--ETSEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV
3ZIV Chain:A ((3-106))
-VIEINDENFDEVIKKSDKVVVVDFWAEWCGPCRMIAPIIEELAEEYAGKVVFGKVNVDENPEIAAKYGIMSIPTLLFFKNGKVVDQLVGARPKEALKERIKKYL
General information:
TITO was launched using:
RESULT:
Template:
3ZIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59763 for 706 contacts (-84.7/contact) +
2D Compatibility (PS) -10557 + (NN) 1115 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 2650
Total energy: -84447.0 ( -119.61 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIV-query.scw
PDB file :
Tito_Scwrl_3ZIV.pdb
: