Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VATKKKTFEEAIAELETIVEALEN---GSASLEDSLDMYQKGIELTKLCQDKLQSAEKRMAKVVTDAGEEIPFEADGE
3MXZ Chain:A ((25-86))
-----HSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKSTLAE------------
General information:
TITO was launched using:
RESULT:
Template:
3MXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3753 for 282 contacts (-13.3/contact) +
2D Compatibility (PS) -6718 + (NN) -5740 + (LL) 996
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -17115.0 ( -60.69 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_3MXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MXZ-query.scw
PDB file :
Tito_Scwrl_3MXZ.pdb
: