Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKSTMLKLILGVLKKQQGSISLFGEKQADFKDWVKI---GFVSQKSNAFNSAFPATVKEV----------VASGLTKKKGLF-KTLNNKDKEDIDYALKRVEMTDYLH---RNIGELSGGQQQRVFIARALVSRPELLILDEPTVGVDVENVKAFYELLAELNRTEEMTLLLVTHDLMAVNTYVNHV-ISINKRIIFDGSAHEYQHYLADRELEILAEQRRREDACLDCDASPV |
| 1G9X Chain:A ((6-239)) | --EILRTENIVKYFGEFKALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRV-YFENKDITNKEPAELYHYGIV----RTFQT--PQPLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLEL-KAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEE------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109797 for 1625 contacts (-67.6/contact) +
2D Compatibility (PS) -23066 + (NN) -3289 + (LL) 3168
1D Compatibility (HY) -18400 + (ID) 3750
Total energy: -155134.0 ( -95.47 by residue)
QMean score : 0.438
|
|
|