Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKDLTPDDEVTVISRELKQRRDSLAEFDKAGRSDLSDKVRSEIVIVEDYAPKQLTPEELENIVKATIEEVGA---SSKADFGKVMSAIMPKVKGKADGGAVNQFVKKYLS
3OL3 Chain:A ((38-94))
----------------------------------------------------------------------------------------ALLKRSLTEDEVVRAAQAILRSTDGQSPVTDDDIRNAVHQIIEKEPTAEEINQVAAR------
General information:
TITO was launched using:
RESULT:
Template:
3OL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7829 for 345 contacts (-22.7/contact) +
2D Compatibility (PS) -5636 + (NN) -417 + (LL) 7864
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -7618.0 ( -22.08 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3OL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OL3-query.scw
PDB file :
Tito_Scwrl_3OL3.pdb
: