Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
2WQ1 Chain:A ((2-29))
-------------------------------------------------------------------------MKQLEDKIEENTSKIYHNTNEIARNTKL-------------
General information:
TITO was launched using:
RESULT:
Template:
2WQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5078 for 102 contacts (49.8/contact) +
2D Compatibility (PS) -3263 + (NN) -3871 + (LL) 8520
1D Compatibility (HY) -800 + (ID) 250
Total energy: 5414.0 ( 53.08 by residue)
QMean score : 0.803
(partial model without unconserved sides chains):
PDB file :
Tito_2WQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WQ1-query.scw
PDB file :
Tito_Scwrl_2WQ1.pdb
: