Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTLTNKLAEKEHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVSAIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILN--KLAMSKVQIPLIIMSYINPIFHLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEEIAKQAEGFIYAVTVNGTTGVRSEFDAHIDSHLAYLKSISPVPVLAGFGVSSIEH-VEKFAHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIKN
2DZV Chain:A ((3-243))
------------KDGSLIPYLTAGDPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPAERLKVIDDMTTGFVYLVSLYGT----EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIG-EKGREATEFLKKKVE-----
General information:
TITO was launched using:
RESULT:
Template:
2DZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191633 for 1963 contacts (-97.6/contact) +
2D Compatibility (PS) -26524 + (NN) -19823 + (LL) 2024
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -254006.0 ( -129.40 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_2DZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZV-query.scw
PDB file :
Tito_Scwrl_2DZV.pdb
: