Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTNELVYEGKAKRLFKTEEAGVLRVAYKDDATALNGVRKESFAGKGELNNQITSLIFSHLAEAGIESHFIRAISETEQLVKEVSIIPLEVVVRNVMAGSLAKRLGKEEGEQIPNAIVEFYYKDDALDDPFINDDHVLYLEVATTSEMDTIRQAARSINKVLQELFNQMNITLIDFKLEFGRDAAGEILLADEISPDTCRLWDKETNQKLDKDVFRRNIGNLTDVYTEVLNRLKQVQN
4O7Y Chain:A ((11-231))
---------KAKKMIPIDDDKLI-MEFKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLGI-SLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYKEIYERI-----
General information:
TITO was launched using:
RESULT:
Template:
4O7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79827 for 1699 contacts (-47.0/contact) +
2D Compatibility (PS) -22914 + (NN) -2100 + (LL) 1320
1D Compatibility (HY) -25200 + (ID) 5100
Total energy: -133821.0 ( -78.76 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_4O7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O7Y-query.scw
PDB file :
Tito_Scwrl_4O7Y.pdb
: