Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFVDGASAGNPGPSGAGIVLKADGIYEQFAIPLAVMTNHEAEFIAIKLGLEEALKKQATLIRLYSDSKVAIEAI-------HKRHAKNPLFKP--HLDAILEMADSLELFFAEWRNVS------QNKQADQLARQAIKKQKQPGVK
1RBU Chain:A ((5-140))
VEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVAL-EALKEHCEVI-LSTDSQYVRQGITQWIHNWKKRGWKTADNKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAA----------
General information:
TITO was launched using:
RESULT:
Template:
1RBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54946 for 922 contacts (-59.6/contact) +
2D Compatibility (PS) -13338 + (NN) -7842 + (LL) 784
1D Compatibility (HY) -3200 + (ID) 2150
Total energy: -80692.0 ( -87.52 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1RBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RBU-query.scw
PDB file :
Tito_Scwrl_1RBU.pdb
: