Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEAKNSADAFLELAIPWVNKERPPYLGELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQSTKYTLTRVRDFLKRKEELM |
1MHC Chain:A ((45-66)) | ---------------------------------------------------MEPRAPWMEKERPEYWKELKLK------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3489 for 86 contacts (-40.6/contact) +
2D Compatibility (PS) -2059 + (NN) 640 + (LL) 7556
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 98.0 ( 1.14 by residue)
QMean score : 0.671
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