Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEAKNSADAFLELAIPWVNKERPPYLGELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQSTKYTLTRVRDFLKRKEELM
1MHC Chain:A ((45-66))---------------------------------------------------MEPRAPWMEKERPEYWKELKLK------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3489 for 86 contacts (-40.6/contact) +
2D Compatibility (PS) -2059 + (NN) 640 + (LL) 7556
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 98.0 ( 1.14 by residue)
QMean score : 0.671

(partial model without unconserved sides chains):
PDB file : Tito_1MHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MHC-query.scw
PDB file : Tito_Scwrl_1MHC.pdb: