Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFA------SDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL
3U1W Chain:A ((100-190))------------------------------------------------------------------------------------------------IVYKIEAEQS-NSEVDLYYSQY-G-NLIKAVDDEINNDAPIVIPKEVSNLMEITFANAELLDIQQN--S--LGYELDMIDNQIYKVA-QLNK-DYRWQST----


General information:
TITO was launched using:
RESULT:

Template: 3U1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7777 for 511 contacts (-15.2/contact) +
2D Compatibility (PS) -9125 + (NN) -2552 + (LL) 8860
1D Compatibility (HY) -5200 + (ID) 400
Total energy: -16194.0 ( -31.69 by residue)
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_3U1W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U1W-query.scw
PDB file : Tito_Scwrl_3U1W.pdb: