Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFA------SDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL |
3U1W Chain:A ((100-190)) | ------------------------------------------------------------------------------------------------IVYKIEAEQS-NSEVDLYYSQY-G-NLIKAVDDEINNDAPIVIPKEVSNLMEITFANAELLDIQQN--S--LGYELDMIDNQIYKVA-QLNK-DYRWQST---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7777 for 511 contacts (-15.2/contact) +
2D Compatibility (PS) -9125 + (NN) -2552 + (LL) 8860
1D Compatibility (HY) -5200 + (ID) 400
Total energy: -16194.0 ( -31.69 by residue)
QMean score : 0.475
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