Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKYVHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTTDPEKAFHDIRLNWDEELYVELHFEEAMSSPEYALVREDNPFAAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALD------TRDEAAFHKLVRILQQMDTEKE |
2B0J Chain:A ((279-330)) | ------------------------------------------------------------------------------------------------------------------------------ADFAQMMADEALTQ-IHNLMKEKGIANMEEALDPAALLGTADSMCFGPLAEIL-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2B0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3213 for 187 contacts (-17.2/contact) +
2D Compatibility (PS) -4585 + (NN) 588 + (LL) 10512
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -448.0 ( -2.40 by residue)
QMean score : 0.335
|
|
|