Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
1WKK Chain:A ((1-137))
MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFFRPEELL----------
General information:
TITO was launched using:
RESULT:
Template:
1WKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70270 for 1042 contacts (-67.4/contact) +
2D Compatibility (PS) -14637 + (NN) -3928 + (LL) 920
1D Compatibility (HY) -15200 + (ID) 4300
Total energy: -107415.0 ( -103.09 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1WKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKK-query.scw
PDB file :
Tito_Scwrl_1WKK.pdb
: