Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
1X8Y Chain:A ((313-386)) | -------------------------------------------------------------------------------------------------------LAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEER-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22738 for 288 contacts (79.0/contact) +
2D Compatibility (PS) -9493 + (NN) -14980 + (LL) 9816
1D Compatibility (HY) 400 + (ID) 750
Total energy: 7731.0 ( 26.84 by residue)
QMean score : 1.238
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