Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVRVLVVDDEDRIRRLLKMYLERENYRIEEASDGDQALSMALNNNY-EVILLDLMMPGKDGIEVCRELREFKST---PVVMLTAKGEEANRVQGFEVGADDYIVKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDGKEIGLTPKEYDLLYYLAKSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSEDAARMIVTVWGLGYKFEVPED
1B00 Chain:A ((4-122))
-----RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQ-LNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR---------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1B00.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81325 for 854 contacts (-95.2/contact) +
2D Compatibility (PS) -12770 + (NN) -7111 + (LL) 8372
1D Compatibility (HY) -13200 + (ID) 3050
Total energy: -109084.0 ( -127.73 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_1B00.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B00-query.scw
PDB file :
Tito_Scwrl_1B00.pdb
: