Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWVQ--KGD----IIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIR--ICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA |
| 3C2R Chain:A ((16-291)) | -------QDVTNWLSEDVPSFDF-GGYVVGSD-LKEANLYCKQDGMLCGVPFAQEVFNQC--ELQVEWLFKEGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDN---------------HFLLECSGGLNL------LCDDIDIYSTSSIHQGTPVIDFSL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137706 for 1887 contacts (-73.0/contact) +
2D Compatibility (PS) -26556 + (NN) -9973 + (LL) 1904
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -196031.0 ( -103.89 by residue)
QMean score : 0.385
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