Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVAISG---GGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEAGIVKREGIPFEAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGYVCGPVVYAAAKLKIPTLIHEQNSVA---------GLTNKFL--SRYTDKVAICFEEVSDSF------ASEKIVFTGNPRASEVVGVDSE------GALEAYGLVSGKPTVLVFGGSRGARGVNEAVEAVLPEWNNR---DFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRA----GATTLAELTALGVPSILIPSPYVTANHQENNARALEKNNAAIV-ITEAELKNTDLMATVDSILNDEAKLNSMKLSAKQMGRPDAAAKLVEAVLSIMK |
| 2IW1 Chain:A ((2-368)) | -IVAFCLYKYFPFGGLQRDFMRIASTVAARG--HHVRVYTQSWEGDCP----KAFELIQVPVKSHTN---------HGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKE-QQNLLLQVGS-DFGRKGVDRSIEALASLPESLRHNT-LLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGY--------AHYIADANCGTVIAEPFSQ--EQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADII- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210838 for 2678 contacts (-78.7/contact) +
2D Compatibility (PS) -36915 + (NN) -20746 + (LL) 1708
1D Compatibility (HY) -1600 + (ID) 2150
Total energy: -270541.0 ( -101.02 by residue)
QMean score : 0.417
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