Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLHYNFMKNNNIKIVAAFDVDPAKVGSVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEAQVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE
2DT5 Chain:A ((2-208))
------KVPEAAISRLITYLRILEELEAQGVHRTSSEQLGGLAQVTAFQVRKDLSYFGSYGTRGVGYTVPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGF-GESFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRV-PGRIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVVLEVPKEVAVENVDFLAGLTRLSFAILNPKWREE
General information:
TITO was launched using:
RESULT:
Template:
2DT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135721 for 1473 contacts (-92.1/contact) +
2D Compatibility (PS) -21883 + (NN) -4012 + (LL) 892
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -179924.0 ( -122.15 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2DT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DT5-query.scw
PDB file :
Tito_Scwrl_2DT5.pdb
: