Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFS--EEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS |
2GOV Chain:A ((29-190)) | -------------------VSYEERACEGGKFATVEVTDKPVDEALREAMPKIMKYVGGTNDKGVG---MGMT----V-PVSFAVFPNE----DGSLQKKLKVWFRIPNQFQGS------------PPAPSDESVKIEEREGITVYSTQFGGYAKEADYVAHATQLRTTLEGTPATYQG---DVYYCAGYDPPMK--PYGRRNEVWLVKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16569 for 1173 contacts (-14.1/contact) +
2D Compatibility (PS) -17127 + (NN) -4359 + (LL) 4068
1D Compatibility (HY) 0 + (ID) 1200
Total energy: -35187.0 ( -30.00 by residue)
QMean score : 0.300
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