Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVRDVNFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPNSGDVLLEGKSIFEWKAKEFAQNVAIVHQSNVLPNELMVKELLYFGRLPYKNWRMTRTKED--DLAVERALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILLLDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVAKGEPEELLTTDLIAETYGVVADVLNDANNGKYIVPQRRKEF
4TQU Chain:S ((5-223))
VSIQNVVKRYDKT-TVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVINDLAPKD--RDVAMVFQNYALYPHLNVRDNISFG------LRLKRTKKSVIDAAVKTAADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLF---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158469 for 1733 contacts (-91.4/contact) +
2D Compatibility (PS) -23953 + (NN) -12028 + (LL) 2548
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -208652.0 ( -120.40 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_4TQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TQU-query.scw
PDB file :
Tito_Scwrl_4TQU.pdb
: