Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFNTVFMATIISAVIGTLWMAIFANYPIAIAPGLGMNAYFVTVVTTQKLDYSVAFAAVFVAGIIFLLLSLTPLREKIIEAIPHNLKAGITAGIGLFIAFLGFRMTGIIVSNDSNLVGLGDLHSKEAILAIVGLLITLILLALNVKGALFIGMIATGIIAFITGELKFTDGIVKLPPMPEFVFTNPIHAFGDVMSYGLYAVVLSFLLITIFDTTGTMIGVAKKAGLMKGESLPNAKQALMADAVATSVGSMFGTTPTSAYIESSAGVAT-GGRTGLTTLTVAILFMVSAF-FAPLVGAVSGISAITAPALIVVGSMMIGAVKEIDWDTLDEAFPAFLVILAMPLTSSIAIGLAFGFISYPVLKVFTGKWRELNWFLIVIA-------------VLFFILVAFLPH----------------------------------------------------------- |
| 5DA0 Chain:A ((14-484)) | ---QREWFANPRKDVLAGIVVALALIPEAIAFSII---AGVDPQVGLYASFIIALI----TAFLGGRPGMISAATGAMALLMTGLVKDH-GIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILIFMAQLPQF------------VGANWQMYAMVAAGLAIIYLLPLVFKAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERT-----DTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQI--------PMAALVAVMMVVAISTFDWGSLRFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFFARKVSQLSQVTPVDEVDGTRTYRVRGQLFFVSTHDFLHQFDFTHPARRVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -362698 for 3436 contacts (-105.6/contact) +
2D Compatibility (PS) -40209 + (NN) -8501 + (LL) 2196
1D Compatibility (HY) -21600 + (ID) 4000
Total energy: -434812.0 ( -126.55 by residue)
QMean score : 0.347
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