Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
2YO0 Chain:A ((287-312))
-----KQIEDKIEEILSKIYHIENEIARIKK--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1550 for 95 contacts (16.3/contact) +
2D Compatibility (PS) -2987 + (NN) -2849 + (LL) 3752
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -2334.0 ( -24.57 by residue)
QMean score : 0.795
(partial model without unconserved sides chains):
PDB file :
Tito_2YO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YO0-query.scw
PDB file :
Tito_Scwrl_2YO0.pdb
: