Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRHSFVSKKNGIIISDGKPKVFIITPVNNSKFSLEINFRQILLVPSLMDRLLFRAEPKKLSNIEALLKQLENKANWQI--IKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL |
1KK8 Chain:A ((652-701)) | ------------------------------------------------------------------------------------------------------SLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQC------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1130 for 145 contacts (-7.8/contact) +
2D Compatibility (PS) -4487 + (NN) -4119 + (LL) 10748
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -2688.0 ( -18.54 by residue)
QMean score : 0.435
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