Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAADGSGKIKDGLV--KSQEGNKTISTNLKTLAD------------SSLTFKDGANTLEVGLKTYTDGVNTAAAGGDKLNAGVSTLAAGVGPLKDGVAALDGGATKLASG---VSTYTSG--VDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKETQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAVHGGTNEAFNSIHQAINGSGSQTLLGGANQLTAGLKSAQAGSAKLVAGTNQLNSQVPTLTSGVGQLAAGSASMENGLSKLNDGGNKLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSNQLAGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELTDKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGALVFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDSIVEFFGTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHPFLPMTYSIYAFRESLAAGMGPNVYSMSMLILTIIMVACVGLLYLSMSHLKKRHDAHESALDDNQKLMALEN |
4K90 Chain:A ((115-308)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKAGNFEYNTNGQGGLGNDYVILNAQDGSGTNNANFATPPDGQPGRMRMYVWTESTPYRDGSFEAGIVIHEYTHGLSNRLTGGPANSNCLNALES--GGMGEGWSDFMATAIRLKPGDKRSTDYTMGEWASNRAGGIRQ-YPYSTSLSTN--------PLTYTSVNSL-NAVHAIGTVWASM----------LYEVLWNLIDKHGKNDAPKPTLRD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 47257 for 1191 contacts (39.7/contact) +
2D Compatibility (PS) -18423 + (NN) -182 + (LL) 47568
1D Compatibility (HY) -7200 + (ID) 2650
Total energy: 66370.0 ( 55.73 by residue)
QMean score : 0.044
|
|
|