Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENDSLCGGHILQEGLHVRFARMHIWAVTRYTSNGRMGMRIFDRWWMDFGGG
3U1U Chain:A ((95-113))
-----------------------------EFVSNQEFTESEFMKWKEA----
General information:
TITO was launched using:
RESULT:
Template:
3U1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1324 for 65 contacts (-20.4/contact) +
2D Compatibility (PS) -2085 + (NN) 171 + (LL) 1996
1D Compatibility (HY) 0 + (ID) 200
Total energy: -1442.0 ( -22.18 by residue)
QMean score : -0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3U1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U1U-query.scw
PDB file :
Tito_Scwrl_3U1U.pdb
: