Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENERKRILELVKQGIISTEEALTLLENISKKEGKTAAKENIRRSAAPREEEQIEEETKEEPSYDYSKGWNNQGNPYTPPKSRKRRPEPTPENHERDEEEGGENSSKDREDSMRNMVNDLSQAGEKIGSFLNSAFKQVKDMPFPFLTSTKIERDFIYHDTTLSILEFEIANGNIEFKPSDSNDIKVHAMIKLFKEYPEDEALKIFFDKTTLRVDEETLRFESKSKQIVTNLTVYLPRREYDYVSVKMLNGNFHMDELSGRDLFVKTTNGNISIGTLNATLAEIESINGNVRIQNGEIRDVALKTFNGNVAVKGNYYSTNLQTKNGN-VNYQLTGNEATFLKAKTGAGNIDVVVPATIGVDGRFHTNLGKLLLDLKDAEILESKTESVSKSITFTKLPNAADSSLKIEAEATTGSVKIRDVK |
2COV Chain:D ((378-469)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPENCQDDFNFNYVSDQEIEVYHVDKGWSAGWNYVCL-------NDYCLPGNKSNGAFRKTFN---AVLGQDYKLTFKVEDRYGQGQQILDRNITFTTQVCN---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2COV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -815 for 616 contacts (-1.3/contact) +
2D Compatibility (PS) -9579 + (NN) 287 + (LL) 20200
1D Compatibility (HY) -1600 + (ID) 850
Total energy: 7643.0 ( 12.41 by residue)
QMean score : 0.206
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