Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFTEK-VVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT
2CVE Chain:A ((2-190))
----SLTLADKVVYEEEIQKSRFIAKAAPVASEEEALAFLAENR--EPEATHNGHAYKIGL---LYRFSDDGEPSGTAGRPILHAIEAQGLDRVAVLVVRYFGGVKLGAGGLVRAYGGVAAEALRRAPKVPLVERVGLAFLVPFAEVGRVYALLEARAL-KAEETYTPEGVRFALLLPKPEREGFLRALLDATRGQVAL-------------
General information:
TITO was launched using:
RESULT:
Template:
2CVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120968 for 1462 contacts (-82.7/contact) +
2D Compatibility (PS) -20669 + (NN) -5364 + (LL) 1172
1D Compatibility (HY) -9600 + (ID) 3500
Total energy: -158929.0 ( -108.71 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_2CVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CVE-query.scw
PDB file :
Tito_Scwrl_2CVE.pdb
: