Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS------EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKATVEGDLVCEAEIMFALSDLPK
3CF8 Chain:A ((14-151))
---IEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAEL---------
General information:
TITO was launched using:
RESULT:
Template:
3CF8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76457 for 963 contacts (-79.4/contact) +
2D Compatibility (PS) -14058 + (NN) -3707 + (LL) 964
1D Compatibility (HY) -13200 + (ID) 3100
Total energy: -109558.0 ( -113.77 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3CF8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CF8-query.scw
PDB file :
Tito_Scwrl_3CF8.pdb
: