Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFMQKWLGLILIPFLMIMFTGTE--YYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYALGYDIPTGRFSLVTAGAFMFVVAAYIQYS-----------KKLFKFLTMIGFKKIDAWSR--------NLLRKITTVTL--NIAGTICFIL--ALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK |
| 4PWO Chain:A ((1-250)) | TQAEKTATDLPPGFSGKAGSVNATPGTKGLDGPTPLADGSFDATIFGPAKELKSADDILNVHRRNAKDPFAV---GAVDAPLVITEFSDFECPFCARWSNQTEPTLMEEYVSKGL-VRIEWNDLPVNGEHALAAAKAGRAAAAQ-GKFDEFRKALFEASRNVSGHPNNTLKDFERFARNAGVKDMERFSREAQDSTYDEVLAKAADYAHGLGVSGTPAFVVGTQYISGAQPTEEFIKVIESELKKSPTFSTPSSH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219185 for 1551 contacts (-141.3/contact) +
2D Compatibility (PS) -20469 + (NN) -444 + (LL) 780
1D Compatibility (HY) 6800 + (ID) 1750
Total energy: -234268.0 ( -151.04 by residue)
QMean score : 0.188
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