Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPD-D------------NGD--------GLAFNKL---------PSNTP----------QL-DYF------IDKKTKIST-DLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSE-SIEKTHWFLEKSSPEKKEIKLISK |
| 3QVM Chain:A ((24-278)) | -----------------------------------TGGGEKTVLLAHGFGCDQNMWRFMLPELE-K-QFT--VIVFDYVGSGQSDLESFS------T-------KRYSSLEGYAKDVEEILVALD----LVNVSIIGHSVSSIIAGIASTHVGD-----RISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQS------AKDSLASPEVGQYMAENIPN-S---QLELI--QAEGHCLHMTDAGLITPLLIHFIQNN------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25228 for 1644 contacts (-15.3/contact) +
2D Compatibility (PS) -21643 + (NN) -11589 + (LL) 4924
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -57636.0 ( -35.06 by residue)
QMean score : 0.348
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