Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKRLVLIVEDEDGISNFISAVLTASDYSVIKAVNGKEALEQTASHSPDVVLLDLGLPDMEGLDVLRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQPSSKESPNDHIIRIQDLYIDDDRRLVKMDDTEIHFTPIEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEKNPAEPAYILTEVGVGYRMAEE
1ZH2 Chain:A ((4-118))
------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR--------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZH2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77712 for 891 contacts (-87.2/contact) +
2D Compatibility (PS) -12945 + (NN) -9559 + (LL) 8460
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -106656.0 ( -119.70 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1ZH2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZH2-query.scw
PDB file :
Tito_Scwrl_1ZH2.pdb
: