Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRIGTSFDAVNEAIENNEANKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK
4K8Z Chain:A ((179-215))
---PY-VDVVSTEREMIKRFLRVVKEKDPDVLITYNGDNFD-----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4K8Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2867 for 137 contacts (-20.9/contact) +
2D Compatibility (PS) -4342 + (NN) -3960 + (LL) 7012
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -8057.0 ( -58.81 by residue)
QMean score : 0.132
(partial model without unconserved sides chains):
PDB file :
Tito_4K8Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K8Z-query.scw
PDB file :
Tito_Scwrl_4K8Z.pdb
: