Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
2WWB Chain:N ((7-39))
----------------YELRTKSKEQLASQLVDLKKELAELK--VQKLSRP------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3774 for 134 contacts (28.2/contact) +
2D Compatibility (PS) -3547 + (NN) -1871 + (LL) 3584
1D Compatibility (HY) 800 + (ID) 200
Total energy: 2540.0 ( 18.96 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: