Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTFIVKKEHISQYPNPLFVNKNESIWVFEEDTEYPGWIFCKVKSSGKEGWIPKQIIQISNDGKSGTVSEDYSARELNVKPGDKLESNRELNGWVWCVTEENEAGWVPRENLEV
4IIM Chain:A ((27-65))
----------------NHLNFNKNDVITVLEQQDM---WWFGEVQ--GQKGWFPKSYVKL-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IIM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24653 for 214 contacts (-115.2/contact) +
2D Compatibility (PS) -4262 + (NN) -578 + (LL) 3380
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -31313.0 ( -146.32 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4IIM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IIM-query.scw
PDB file :
Tito_Scwrl_4IIM.pdb
: