Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VILIIDHNDSFTYNLYQYFLEL--QEEVQVVSATSFSLEAFQQLAPEMVVLSPGPGSPEDFPVSLALLGKIQVPILGICLGHQIIGHFFGAKVVPANVPVHGKTSVISHTGEGLFADLEPAFQVTRYHSLVIDPTTVPVNLKVTAVTEDGVIMGLVHATKPIHSVQFHPEAILSENGHAILKNFVRLGRNVK
2VXO Chain:A ((32-221))
-VVILDAG--YGKVIDRRVRELFVQSEIFPLETPAF---AIKEQGFRAIIISGGP-----APWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK-------VFNISVDNTCSLFRGLQKEEVVLLTHGDSVD--KVADGFKVVARSGN-IVAGIANESKKLYGAQFHPEVGLTENGKVILKNFL-------
General information:
TITO was launched using:
RESULT:
Template:
2VXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142205 for 1363 contacts (-104.3/contact) +
2D Compatibility (PS) -16846 + (NN) -1901 + (LL) 328
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: -172674.0 ( -126.69 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_2VXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VXO-query.scw
PDB file :
Tito_Scwrl_2VXO.pdb
: