Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQTLLGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN
3CHM Chain:A ((133-147))
---------------------------NECMYAGIVRGKLDQ-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CHM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2453 for 45 contacts (-54.5/contact) +
2D Compatibility (PS) -1503 + (NN) 537 + (LL) 6308
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 1089.0 ( 24.20 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_3CHM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CHM-query.scw
PDB file :
Tito_Scwrl_3CHM.pdb
: