Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGL-LGGGGVDGAIHQAAGPDLLKECQEVINRIG---SCPAGEAVITSAGDLKATYIIHAVGPIWKDGEHQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCF--DEENLKLYNKLINSEVV
3Q71 Chain:A ((39-208))
LQMLLVKEGVQNAKTDVVVNSVPLDLVLSRGPLSKSLLEKAGPEL----QEELDTVGQGVAVSMGTVLKTSSWNLDCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQLKTLQEVHFLLHPSDHENIQAFS--------
General information:
TITO was launched using:
RESULT:
Template:
3Q71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113439 for 1342 contacts (-84.5/contact) +
2D Compatibility (PS) -18618 + (NN) -14367 + (LL) 1224
1D Compatibility (HY) -14400 + (ID) 2400
Total energy: -162000.0 ( -120.72 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3Q71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q71-query.scw
PDB file :
Tito_Scwrl_3Q71.pdb
: