Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MKKANQLIAAIFDVNNTFMQGCNVVFDLALLNLLFMITCLPLVTIGAAKISLYRTLWQKLEGDQTNLLILYIKHLKKEWFQGMLLGLVELSI----LVVIIFDLTILHYQIGFIVSFLK------ITCYAFLLLTVM------------------TSIYLFPMAARYEMSLLDTVKKSFIMAC-----------LNLKWTGVLMFLLIMTWFIMVQSSLLFMLTVSAIFIFAYTAFAYFK----------IIILQKQFAYFSKQQGDYQ--------- |
1C3Q Chain:A ((13-284)) | MDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAK--------IAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATIERVTVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -352494 for 1874 contacts (-188.1/contact) +
2D Compatibility (PS) -23062 + (NN) -7582 + (LL) 548
1D Compatibility (HY) 3600 + (ID) 1500
Total energy: -380490.0 ( -203.04 by residue)
QMean score : 0.309
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