Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLLVVGSGGREHAIAKKLLASKDVDQVFVAPGNDGMTLDGLDLVNIGISEHSRLIDFAKENEIAWTFIGPDDALAAGIVDDFNSAGLRAFGPTKAAAELEWSKDFAKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPIVVKADGLALGKGVVVAETVEQAVEAAQEMLLDNKFGDSGARVVIEEFLDGEEFSLFAFANGDKFYIMPTAQDHKRAFDGDKGPNTGGMGAYAPVPHLPQSVVDTAVETIIKPVLEGMIAEGRPYLGVLYAGLILTADGPKVIEFNSRFGDPETQIILPRLTSDFAQNIDDIMMG--IEPYITWQKDGVTLGVVVASEGYPLDYEKG--VPLPEKTDGDIITYYAGAKFAENSKALLSNGGRVYMLVTTEGSVKAGQDKIYTQLAQQDTTGLFYRNDIGSKAIK
1VKZ Chain:A ((16-410))VRVHILGSGGREHAIGWAF--AKQGYEVHFYPGNAGTKRDGTNHP----YEGEKTLKAIPEEDI--VIPGSEEFLVE------RS---NVFGPVKEVARLEGSKVYAKRFMKKYGIRTARFEVAETPEELREKIKKFSPPYVIKADGLARGKGVLILDSKEETIEKGSKLIIGELIKGVKGPVVIDEFLAGNELSAMAVVNGRNFVILPFVRDYKRLMDGDRGPNTGGMGSWGPV-EIPSDTIKK-IEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGDPYILEYNVRLGDPETEVIVTLNPEGFVNAVLEGYRGGKMEPV---EPRGFAVDVVLAARGYPDAPEKGKEITLPEEG----LIFFAGV--AEKDGKLVTNGGRVLHCMGTGETKEEARRKAYELAEKVHFEGKTYRRDIA-----


General information:
TITO was launched using:
RESULT:

Template: 1VKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159034 for 3422 contacts (-46.5/contact) +
2D Compatibility (PS) -42423 + (NN) -18617 + (LL) 1832
1D Compatibility (HY) -24400 + (ID) 7200
Total energy: -249842.0 ( -73.01 by residue)
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_1VKZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VKZ-query.scw
PDB file : Tito_Scwrl_1VKZ.pdb: