Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSA--AFNKLLPEVQL--DAAVSRNFSKSFDIFENRIQNKALSKIVVLAVGVNSLDN----YKTDLSQFIKSLP---KGHRLIIVTPYNAKN-----MSQVTTVRDYELS-LMKKYNYITVADWYKVATEHP----EIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
1ES9 Chain:A ((35-216)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDKEPEVVFIGDSLVQLMHQCEIWRELFSPLHALNFGIGGDSTQHVLWRLENGELEHIRPKIVVVWVGTNNHGHTAEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQHPNPLREKNRRVNELVRAALA-GHPRAHFLDADPGFVHSDGTISHH-DMYDYLHLSR-L--GYTPVCRALHSLLLRLL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ES9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79294 for 1201 contacts (-66.0/contact) +
2D Compatibility (PS) -17055 + (NN) -139 + (LL) 35924
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -66914.0 ( -55.72 by residue)
QMean score : 0.529
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