Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPKRGFSNINAKEYALVNLDQLNVFEDGTEVTPVVLKEAGIVRAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI
1NWY Chain:J ((4-140))
---HDLKPTPGSRKDRKRVGRG-PGGTDKTAGRGHKGQKSRSGAGKGAFFEGGRSRLIARLPKRGFNNVGT-TYEVVKLSQLQDLED-TTFDRDTLEAYRLVRRKNRPVKLLASGEISRAVTVHVDAASAAAIKAVEAAGGRVVLP
General information:
TITO was launched using:
RESULT:
Template:
1NWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1302615 for 7021 contacts (185.5/contact) +
2D Compatibility (PS) -12696 + (NN) -4223 + (LL) 392
1D Compatibility (HY) 2400 + (ID) 900
Total energy: 1287588.0 ( 183.39 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1NWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NWY-query.scw
PDB file :
Tito_Scwrl_1NWY.pdb
: