Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3FOK Chain:A ((3-299)) | PPIISPESFEALRRMRAAEPTMVAERFKQRRKR-----ELLGEDGKLFIVAADHPARGALAVGDNETAMANRYELLERMAIALSRPGVDGVLGTPDIIDDLAALGLLDDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVVEEMERVMESTTMPTLLLGGEGGPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVDTAARLVHTDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5406 for 95 contacts (56.9/contact) +
2D Compatibility (PS) -3509 + (NN) -3663 + (LL) 512
1D Compatibility (HY) 1600 + (ID) 100
Total energy: 246.0 ( 2.59 by residue)
QMean score : 0.411
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