Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTVYFDGNFWLGLIEYDDDGDYKVFRYFFG-KEPKDDDVFNFINHKLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH
2PY8 Chain:A ((19-46))
----------------------TYQAVLRIQSELGETNPPQAIWLNQYLASHSIQNGETFLTELLDENKELVLRILAVREDIAESVLDFLPGMTRNSLAESNIAHRRHLLERLTRTVAEVDNFPS---------------
General information:
TITO was launched using:
RESULT:
Template:
2PY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2767 for 122 contacts (-22.7/contact) +
2D Compatibility (PS) -2744 + (NN) -2332 + (LL) 2432
1D Compatibility (HY) -400 + (ID) 150
Total energy: -5961.0 ( -48.86 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2PY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PY8-query.scw
PDB file :
Tito_Scwrl_2PY8.pdb
: