Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVP------VENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNE-----SDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
4MPH Chain:B ((12-192)) | -----------------------------------------------------------AVVNKEYGLP---EDYKPEDLVVPNVPFSFSGTLEKSYLRKEAAEALERLFDLANKEGIQLNAVSGFRSYDYQKKLY-----------ANNVKR--------FSAKPGHSEHQTGLTMDVSSKSANNELELTFANTKEGKWLKENAHRAGFIIRYPKGKESITGYAYEPWHIRYVG-DIAESIYKKKLTLEEYMNL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20977 for 1266 contacts (-16.6/contact) +
2D Compatibility (PS) -17100 + (NN) -6394 + (LL) 6988
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: -49983.0 ( -39.48 by residue)
QMean score : 0.349
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