Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTKVEEIRSYLIASIQNGKLAPGDRLPSIRQLANQFSCNKDTVQRVLMELRFDNYVYAKPRSGYYVFDSHEEEVEEGVSLPNSEIANIAYDDFRLCLNETLIGREDYLFNYYYRQEGLLDLSKAVAKLMEETGVYVPLD--DIVITAGTQQALFILTQVTFPNRKSRVLIEEPTYPRMIELIKTQNLPYETISRGTHGIDFQRLEEIF-----QTQSIKFFYVIPRMHNPLGTSYNPVEMKRLIEMAEKYDVYIVEDDYMSDF----ASQSPLHYYDTHGRVIYLKSFSKAIFPALRLAAICLPQALKSTFMAYKKLMDYDTNLILQKALALYIENGLYGKNSQYLKYRYQKDLANSKSILADQPNLPPYSLHHDSVLFDCSKLDNFKILRQYGDTLENYFCQKSHQSLLQVKNDSCLKQFLGSL |
1WST Chain:A ((79-302)) | ----------------------------------------------------------------------------------------------------------------YGTTKGFTPLRLALARWMEKR-YDIPMSKVEIMTVAGSQQALDLIGRV-FLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178092 for 1841 contacts (-96.7/contact) +
2D Compatibility (PS) -23771 + (NN) -17704 + (LL) 7632
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -230585.0 ( -125.25 by residue)
QMean score : 0.555
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