Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMI---SLTERWQAKRINFQLDSKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQ--GNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS
4BIV Chain:A ((29-294))------------------------------------------------------------------------------KPARKLKNAADEVAQGNLRQHPELEAGPQ-------EFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRR----RSGESKELERIETEAQRLDSMINDLLVMSR--NQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDG---ITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLY


General information:
TITO was launched using:
RESULT:

Template: 4BIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79167 for 1906 contacts (-41.5/contact) +
2D Compatibility (PS) -27854 + (NN) -11758 + (LL) 9668
1D Compatibility (HY) -12800 + (ID) 3450
Total energy: -125361.0 ( -65.77 by residue)
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_4BIV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BIV-query.scw
PDB file : Tito_Scwrl_4BIV.pdb: