Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKQKNNWRRVGVGVLTLASVATLAACGSKSASQDSNGAINWAIPTEINTLDLSKVTDTYSNLAIGNSSSNFLRLDKDGKTRPDLATKVDVSKDGLTYTATLRKGLKWSDGSKLTAKDFVYSWQRLVDPKTASQYAYLAVEGHVLNADKINEGQEKDLNKLGVKAEGDDKVVITLSSPSPQFIYYLAFTNFMPQKQEVVEKYGKDYATTSKNTVYSGPYTVEGWNGSNGTFTLKKNKNYWDAKNVKTKEVRIQTVKKPDTAVQMYKRGELDAANISNTSAIYQANKNNKDVTDVLEA----TTAYMQYNTTGSVKGLDNVKIRRALNLATNRKGVVQAAVDTGSKPAIAFAPTGLAKTPDGTDLAKYVAP-GYEYNKTEAAKLFKEGLAESGLTKLK------LTITADADVPAAKNSVDYIKSTWEAALPGLTVEEKFVTFKQRLEDSRKQNFDIVVSVWGGDYPEGSTFYGLFKSDSQNNDGKFANKDYDAAYNKAISEDALKPEESAKD---YKEAEKILFEQGAYNPLYFRSGKGLQNPKLKGVIRNTTGLSIDFTHAYKK |
| 1B0H Chain:A ((21-497)) | ---------------------------------------------SEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWE-NKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGK-KPATDLGVKALDDHTFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFG-DKWTQPANIVTNGAYKLKNW-VVNERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGEIDMT--YNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKA--PFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSY-------TPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADKPLTFDLLYNTSDLH----KKLAIAVASIWKKNL-GVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKS----PAFDKLIA-DTLKVADDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYII |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26838 for 3879 contacts (-6.9/contact) +
2D Compatibility (PS) -50271 + (NN) -26035 + (LL) 4040
1D Compatibility (HY) -22000 + (ID) 7750
Total energy: -128854.0 ( -33.22 by residue)
QMean score : 0.436
|
|
|