Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSREYITLSKNIIKHLGGQNNINNVYHCQTRLRFSLNDPTKVNLEQLKTLKEVKTVVISGGQHQIVI-GTHVAKVFEEINSLIETNSTTKTEQTKKAKAVSRIIDFVSGTFQPILPALSGAGMIKALLALLLVFKILTPLSQTYILLNLFADGVFYFLPILIAITAAQKLKANPILALGTVVMLLHPNWANLVASGKPVSLFHTIPFTLTNYASSVIPIILIICVQAYIEKYLNQIIPKSLRLVLVPMLIFLSMGILSFSILGPMGTIAGQYLAVIFTFLSKYASWAPAFLVGAFAPILIMFGVHSGIAALGITQLTKLGFDSIFGPGMLCSNIAQATAGTVVTLITKEKKLKEIAGPAAITAYMGITEPILYGVNLPKRYPLIASLIGGGLGGLYAGIMNAHRFAVGSSGLPGLFLYISHTSTHLFITMLIAVIITVSTTAILTFILAQYYEKQVSIRQRD |
| 3CCD Chain:A ((40-83)) | ---------------------------------------KSASAKSLFKL-QTLGL-TQGTVVTISAEGEDEQKAVEHLVKLMAELE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11005 for 185 contacts (-59.5/contact) +
2D Compatibility (PS) -4323 + (NN) 1105 + (LL) 33544
1D Compatibility (HY) 0 + (ID) 400
Total energy: 18921.0 ( 102.28 by residue)
QMean score : 0.476
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