Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYDTLIIGSGPGGMTAALYAARSNLKV----GLIEQG-APGGQMNNTAEIENYPGYDH-ISGPELSMKMYEPLEKFEVEHIYGIVQRVENDGDVKRVITED-ESYEAKTVILATGAKNSLLGVPGEEEYTSRGVSYCAVCDGA--FFRDQDLLVVGGGDSAVEEAVFLTQFAKSVTIIHRRDQLRAQKVLQDRAFANEKIKFVWDSVVKEIKGNEIKVSGVTVENLKTGEISEMTFGGVFIYVGLKPHSSMVSELGITDETGWVLTDTNMKTSIPGLYAIGDVRQKDLRQIATAVGEGAIAGQGVYNYITEHF |
4CBQ Chain:A ((4-314)) | IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTE-GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158546 for 2580 contacts (-61.5/contact) +
2D Compatibility (PS) -31965 + (NN) -3129 + (LL) 184
1D Compatibility (HY) -22800 + (ID) 6050
Total energy: -222306.0 ( -86.17 by residue)
QMean score : 0.485
|
|
|