Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG----QRGLLAGNIGFPASEVVQAADDKDILVMELSSFQLMGV----KEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKTTKA-TIVPFSTTEKVDGAYVQDKQLFYKGENIMLVDDIG-----VP--GSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTN---ILATQKALSGFDNTKVILIAG----GLDRGNEFDELIPDIT--GLKHMVVLGESASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE |
| 4ZIY Chain:A ((120-413)) | -------------------------------------------------------------------------------------------------------------AQLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMM-LLELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAGILNIGTAH---FGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAEIREAAKSHQIMSFGAGGDV---FATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNVQNATAAVAFALALGVSLEDIVKGLEQAQGAKGRLNFIQKTPHL-FIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGEL---SWQEHHDLGRDLAELPLDHIVAVGQFASAALEGTKLKAFQTQAEALPFLINLIQTHQSMSFLFKGSRFTHMETLMADLMEK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115123 for 2030 contacts (-56.7/contact) +
2D Compatibility (PS) -28377 + (NN) -5452 + (LL) 9136
1D Compatibility (HY) -14400 + (ID) 3750
Total energy: -157966.0 ( -77.82 by residue)
QMean score : 0.486
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